Dr. Iva Veseli 

Carl von Ossietzky Universität Oldenburg, GERMANY
Juli 2025 - Juni 2028
Associate Junior Fellow

Projekte & Publikationen

Abstract

Anvi’o (https://anvio.org) is an open-source software platform that makes integrative, customizable

analyses of ‘omics datasets accessible to microbiologists. As a software that is developed by and for

scientists in the microbial ‘omics field, anvi’o has grown organically in response to the research needs of its

user community. Though the platform’s capabilities are already extensive, anvi’o users have suggested

many relevant improvements and feature requests, such as explicit support for eukaryotic genomes and

integration of proteomic datasets; however, a lack of dedicated time and expertise available to the

software’s geographically-spread development team stands in the way of implementing these critical

updates. We therefore propose a ‘hackathon’ that will bring together anvi’o developers with a variety of

experts from both biological and computational fields to collaboratively improve the platform. This

workshop will: (1) enable participating scientists to determine which new features in anvi’o would be most

relevant to microbiology research, (2) provide developers with access to biological insights that will drive

the implementation and testing of novel features, and (3) facilitate an exchange of ideas and knowledge

that will influence the long-term trajectory of the platform’s development, with the central aim of

substantially expanding the platform’s capabilities for the benefit of hundreds of microbiologists around

the globe.